Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930845.1_cds_XP_016477821.1_69507
CDS Infomation

[gene=LOC107799245] [db_xref=GeneID:107799245] [protein=putative GPI-anchor transamidase] [protein_id=XP_016477821.1] [location=join(386..510,1655..1696,1818..1962,2638..2867,3154..3211,4154..4231,4357..4445,5864..5945,6629..6817,6928..7074)] [gbkey=CDS]
Sequence

ATGAAATCCACATTTCTGTTGTGTTTTCTTCTGTTTTCTACTTACCTTTGCAATGGGATC
GCATCAACTTCATCTGCGATGCATACGAACAATTGGGCTGTTTTGGTCTGCACTTCTCGT
TTCTGGTTTAATTACAGACACATGGCTAATACTTTGTCTTTGTACAGAACTGTAAAACGA
TTAGGCATACCTGATGAAAGAATTATTCTGATGTTGGCTGATGATATGGCTTGCAATTCT
CGGAATAAATACCCTGCACAGGTCTTTAACAATGAAAACCACAGGCTAAACTTATATGGA
GATAACGTTGAGGTAGATTATCGAGGTTATGAAGTAACGGTTGAAAATTTTTTGAGGGTG
TTGACTGGTCGTCACGAAACAGCTGTCCCAAGATCAAAACGTCTTCTTAGTGATGAAGGA
AGCCACATACTTCTGTACATGACAGGGCATGGTGGAGACGAGTTTTTAAAATTTCAGGAT
TCAGAGGAGCTTCAAAGTCATGATTTAGCTGATGCAGTGAAACAAATGAAAGAAAAGCGT
AGATTCAAGGAGCTGCTAATAATGGTTGACACTTGCCAAGCTGCTACTCTTTTCTCTCAG
CTTCAATCACCCGGCGTTTTGGCAATTGGGAGTAGCATGAAAGGGGAAAATTCGTACTCG
CATCACTTGGATGCTGATGTTGGTGTTTCAGTTATAGATCGATTCACATTTTATACCCTT
GCTTTTTTTGAGAGGGTGAACATGTATGCTAATGCCTCATTGGGCAGTCTTTTCAGTTCA
TATAATCCAAATATGCTGATGTCAACTGCATATTATCGAACAGATCTATACCCTCGTCAA
CTAGAAGAGGTACCAGTGACAAACTTTTTCGGTTCAGTCATGGAGACGGTACACACTGAT
TCTGCTTATAAAGCATTCACTGGTAAAGATTCCACAAAGTCCACATTAAAGATGCCTCTT
GGGAAATCCAGCCAAGGCATACGACGAACACTTGCAAGTTCAGATGTTCAGTGTCCAACT
ACTGACTCAAATATTGAGGATCCACAAGATTCTTGTCCTTTCACACATTTTTGGAATTCG
GTGGATGAGAAAATGAGAAAGGTTAAGGGTCTAGATACCTGGGTGAGCTCTGGCTTGTTG
TTGATGTTTCCGTTGGTGGCATTTTCCTCTTGGCTCTCATTTTGA

Peptide Sequence

PEP ID

XP_016477821.1
PEP Infomation

PREDICTED: putative GPI-anchor transamidase [Nicotiana tabacum]
Sequence

MKSTFLLCFLLFSTYLCNGIASTSSAMHTNNWAVLVCTSRFWFNYRHMANTLSLYRTVKR
LGIPDERIILMLADDMACNSRNKYPAQVFNNENHRLNLYGDNVEVDYRGYEVTVENFLRV
LTGRHETAVPRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKR
RFKELLIMVDTCQAATLFSQLQSPGVLAIGSSMKGENSYSHHLDADVGVSVIDRFTFYTL
AFFERVNMYANASLGSLFSSYNPNMLMSTAYYRTDLYPRQLEEVPVTNFFGSVMETVHTD
SAYKAFTGKDSTKSTLKMPLGKSSQGIRRTLASSDVQCPTTDSNIEDPQDSCPFTHFWNS
VDEKMRKVKGLDTWVSSGLLLMFPLVAFSSWLSF

Transcript Sequence

Gene sequence data has not been registered.